HyperGal: hyperspectral scene modeling for supernova typing with the Integral Field Spectrograph SEDmachine

Recent developments in time domain astronomy, like the Zwicky Transient Facility, have made possible a daily scan of the entire visible sky, leading to the discovery of hundreds of new transients every night. Among them, 10 to 15 are supernovae (SNe), which have to be classified prior to cosmological use. The Spectral Energy Distribution machine (SEDm), a low resolution Integral Field Spectrograph, has been designed, built, and operated to spectroscopically classify targets detected by the ZTF main camera. The current Pysedm pipeline is limited by contamination when the transient is too close to its host galaxy core; this can lead to an incorrect typing and ultimately bias the cosmological analyses, and affect the SN sample homogeneity in terms of local environment properties. We present a new scene modeler to extract the transient spectrum from its structured background, aiming at improving the typing efficiency of the SEDm. HyperGal is a fully chromatic scene modeler, which uses pre-transient photometric images to generate a hyperspectral model of the host galaxy; it is based on the CIGALE SED fitter used as a physically-motivated spectral interpolator. The galaxy model, complemented by a point source and a diffuse background component, is projected onto the SEDm spectro-spatial observation space and adjusted to observations. The full procedure is validated on 5000 simulated cubes. We introduce the contrast as the transient-to-total flux ratio at SN location. From estimated contrast distribution of real SEDm observations, we show that HyperGal correctly classifies ~95% of SNe Ia. Compared to the standard extraction method, HyperGal correctly classifies 10% more SNe Ia. The false positive rate is less than 2%, half as much as the standard extraction method. Assuming a similar contrast distribution for core-collapse SNe, HyperGal classifies 14% (11%) additional SNe II (Ibc).Comment: 14 pages, 17 figures, submitted to Astronomy & Astrophysic

Ginkgo biloba’s footprint of dynamic Pleistocene history dates back only 390,000 years ago

Background: At the end of the Pliocene and the beginning of Pleistocene glaciation and deglaciation cycles Ginkgo biloba went extinct all over the world, and only few populations remained in China in relict areas serving as sanctuary for Tertiary relict trees. Yet the status of these regions as refuge areas with naturally existing populations has been proven not earlier than one decade ago. Herein we elaborated the hypothesis that during the Pleistocene cooling periods G. biloba expanded its distribution range in China repeatedly. Whole plastid genomes were sequenced, assembled and annotated, and sequence data was analyzed in a phylogenetic framework of the entire gymnosperms to establish a robust spatio-temporal framework for gymnosperms and in particular for G. biloba Pleistocene evolutionary history. Results: Using a phylogenetic approach, we identified that Ginkgoatae stem group age is about 325 million years, whereas crown group radiation of extant Ginkgo started not earlier than 390,000 years ago. During repeated warming phases, Gingko populations were separated and isolated by contraction of distribution range and retreated into mountainous regions serving as refuge for warm-temperate deciduous forests. Diversification and phylogenetic splits correlate with the onset of cooling phases when Ginkgo expanded its distribution range and gene pools merged. Conclusions: Analysis of whole plastid genome sequence data representing the entire spatio-temporal genetic variation of wild extant Ginkgo populations revealed the deepest temporal footprint dating back to approximately 390,000 years ago. Present-day directional West-East admixture of genetic diversity is shown to be the result of pronounced effects of the last cooling period. Our evolutionary framework will serve as a conceptual roadmap for forthcoming genomic sequence data, which can then provide deep insights into the demographic history of Ginkgo

Towards Lightweight Dynamic Adaptation : A Framework and its Evaluation

Many modern systems must run in continually changing contexts. For example, a computer vision system to detect vandalism in train stations must function during the day and at night. The software components for image acquisition and people detection used during daytime may not be the same as those used at night. The system must adapt by replacing running components such as image acquisition from color to infra-red. This adaptation involves context detection, decision on change in components, followed by seamless execution of a new configuration of components. All this must occur at runtime while minimizing the impact of dynamic change on continuity and loss in performance. We present Girgit, a lightweight Python-based framework for building dynamic adaptive software systems. We evaluate it by building a dynamically adaptive vision system followed by performing rigorous experiments to determine its continuity and performance.Sociedad Argentina de Informática e Investigación Operativ

Le référentiel taxonomique Florical et les caractéristiques de la flore vasculaire indigène de la Nouvelle-Calédonie

The taxonomic reference base Florical and characteristics of the native vascular flora of New Caledonia. The floristic inventory presented here comprises the evolving computerised database Florical (http://www.botanique.nc/herbier/florical). As of the date of publication, it lists all native vascular plant species (as well as infraspecific taxa) present in the territory of New Caledonia, whether validly published or in press, along with their basionym, organised according to the most recent classifications systems (APG III 2009 for the angiosperms, Smith et at [2006] for the ferns and lycophytes, and Mabberley [2009] for the gymnosperms), accompanied by their status (native or endemic) and the various vegetation types in which they occur. After a brief historical review of our knowledge of New Caledonian botany, the characteristics (richness, composition and endemism) of the different taxonomic groups (ferns and lycophytes, gymnosperms and then angiosperms -mono- and dicotyledons) are analyzed, followed by an assessment of the distribution of these groups among the vegetation types. The vascular flora of New Caledonia is characterised by its high level of richness (3371 species, including 3099 for the flowering plants alone), despite the absence or under-representation of some taxa that are abundantly represented elsewhere in the tropics, and especially by its remarkable distinctiveness (with endemism at the species level reaching 74,7%, and 77.8% for the flowering plants). The flora stands out by the presence of several relictual taxa and a high level of speciation among certain groups, despite the fact that the island was re-colonised relatively recently following the total submersion of its much older basement during the Paleocene and the Oligocene. Details of the measures taken to conserve this extraordinary natural heritage show that only 3.4% of the territory's total surface area is effectively protected. Despite the undeniable progress made in recent years by the authorities concerned, significant work remains to be done, especially in the northern Province

Standardizing Type Ia Supernova Absolute Magnitudes Using Gaussian Process Data Regression

We present a novel class of models for Type Ia supernova time-evolving spectral energy distributions (SED) and absolute magnitudes: they are each modeled as stochastic functions described by Gaussian processes. The values of the SED and absolute magnitudes are defined through well-defined regression prescriptions, so that data directly inform the models. As a proof of concept, we implement a model for synthetic photometry built from the spectrophotometric time series from the Nearby Supernova Factory. Absolute magnitudes at peak $B$ brightness are calibrated to 0.13 mag in the $g$-band and to as low as 0.09 mag in the $z=0.25$ blueshifted $i$-band, where the dispersion includes contributions from measurement uncertainties and peculiar velocities. The methodology can be applied to spectrophotometric time series of supernovae that span a range of redshifts to simultaneously standardize supernovae together with fitting cosmological parameters.Comment: 47 pages, 15 figures, accepted for publication by Astrophysical Journa

Atmospheric extinction properties above Mauna Kea from the Nearby Supernova Factory spectro-photometric data set

We present a new atmospheric extinction curve for Mauna Kea spanning 3200--9700 \AA. It is the most comprehensive to date, being based on some 4285 standard star spectra obtained on 478 nights spread over a period of 7 years obtained by the Nearby SuperNova Factory using the SuperNova Integral Field Spectrograph. This mean curve and its dispersion can be used as an aid in calibrating spectroscopic or imaging data from Mauna Kea, and in estimating the calibration uncertainty associated with the use of a mean extinction curve. Our method for decomposing the extinction curve into physical components, and the ability to determine the chromatic portion of the extinction even on cloudy nights, is described and verified over the wide range of conditions sampled by our large dataset. We demonstrate good agreement with atmospheric science data obtain at nearby Mauna Loa Observatory, and with previously published measurements of the extinction above Mauna Kea.Comment: 22 pages, 24 figures, 6 table

Type Ia Supernova Hubble Residuals and Host-Galaxy Properties

Kim et al. (2013) [K13] introduced a new methodology for determining peak-brightness absolute magnitudes of type Ia supernovae from multi-band light curves. We examine the relation between their parameterization of light curves and Hubble residuals, based on photometry synthesized from the Nearby Supernova Factory spectrophotometric time series, with global host-galaxy properties. The K13 Hubble residual step with host mass is $0.013\pm 0.031$ mag for a supernova subsample with data coverage corresponding to the K13 training; at $\ll 1\sigma$, the step is not significant and lower than previous measurements. Relaxing the data coverage requirement the Hubble residual step with host mass is $0.045\pm 0.026$ mag for the larger sample; a calculation using the modes of the distributions, less sensitive to outliers, yields a step of 0.019 mag. The analysis of this article uses K13 inferred luminosities, as distinguished from previous works that use magnitude corrections as a function of SALT2 color and stretch parameters: Steps at $>2\sigma$ significance are found in SALT2 Hubble residuals in samples split by the values of their K13 $x(1)$ and $x(2)$ light-curve parameters. $x(1)$ affects the light-curve width and color around peak (similar to the $\Delta m_{15}$ and stretch parameters), and $x(2)$ affects colors, the near-UV light-curve width, and the light-curve decline 20 to 30 days after peak brightness. The novel light-curve analysis, increased parameter set, and magnitude corrections of K13 may be capturing features of SN~Ia diversity arising from progenitor stellar evolution.Comment: 17 pages, 6 figures. Accepted by Astrophysical Journa

Host Galaxies of Type Ia Supernovae from the Nearby Supernova Factory

We present photometric and spectroscopic observations of galaxies hosting Type Ia supernovae (SNe Ia) observed by the Nearby Supernova Factory (SNfactory). Combining GALEX UV data with optical and near infrared photometry, we employ stellar population synthesis techniques to measure SN Ia host galaxy stellar masses, star-formation rates (SFRs), and reddening due to dust. We reinforce the key role of GALEX UV data in deriving accurate estimates of galaxy SFRs and dust extinction. Optical spectra of SN Ia host galaxies are fitted simultaneously for their stellar continua and emission lines fluxes, from which we derive high precision redshifts, gas-phase metallicities, and Halpha-based SFRs. With these data we show that SN Ia host galaxies present tight agreement with the fiducial galaxy mass-metallicity relation from SDSS for stellar masses log(M_*/M_Sun)>8.5 where the relation is well-defined. The star-formation activity of SN Ia host galaxies is consistent with a sample of comparable SDSS field galaxies, though this comparison is limited by systematic uncertainties in SFR measurements. Our analysis indicates that SN Ia host galaxies are, on average, typical representatives of normal field galaxies.Comment: 25 pages, 13 figures, accepted for publication in Ap